Talks

WhenWhereTitleMaterials
2021/11/30Computational Biology Department Days, Pasteur InstituteDeep learning for biological sequencesslides
2021/11/17ELLIS Life / NCT Data Science seminar, Heidelberg University, GermanyMachine learning for single cell omicsslides
2021/11/16#FocusAI conference, Institut Henri Poincare, Paris, FranceMachine learning against cancerslides
2021/11/9Mathematical Institute for Data Science seminar, Johns Hopkins university, USADeep embedding of biological sequencesslides
2021/10/15Learning theory workshop, GoogleFraming RNN as a kernel method: a neural ODE approachslides
2021/10/1When AI meets Biology: a workshop, zoom, WorldMachine learning for single-cell omics dataslides
2021/9/274th course on Computational Systems Biology of Cancer, Institut Curie, Paris, FranceMachine learning against cancerslides
2021/7/7JOBIM conference, Paris, FranceDeep embedding of biological sequencesslides
2021/7/6PAISS summer school, Paris, FranceMachine learning against cancerslides
2021/6/23AI and data science for biology symposium, Sorbonne University, Paris, FranceDeep embedding of biological sequencesslides
2021/2/3Computational medicine and bioinformatics seminar, University of Michigan, USAComputational analysis of tumour heterogeneity, from bulk to single-cell genomicsslides, video
2020/8/20Google Research India AI summer school, India (virtual)Differentiable ranking and sortingslides
2020/6/22CIS colloquim, EPFL, Lausanne, Switzerland (virtual)Differentiable ranking and sortingslides
2020/1/22Bioinformatics Center seminar, Kyoto University, Kyoto, JapanComputational analysis of tumour heterogeneity, from bulk to single-cell genomicsslides
2020/01/20ICBBB 2020, Kyoto, JapanLearning from single-cell genomic dataslides
2020/01/14Statistics and Computation workshop at the Alan Turing Institute, London, UKLearning from ranks, learning to rankslides
2019/12/2ICB seminar, Helmholtz Center, Munich, GermanyComputational analysis of tumour heterogeneity, from bulk to single-cell genomicsslides
2019/11/27SOLARIS workshop at INRIA, Grenoble, FranceLearning from ranks, learning to rankslides
2019/11/08LifeTime unconference 2.0, Montpellier, FranceSingle-cell genomics: Learning gene networks and integrating multi-omics dataslides
2019/10/15Cellimageomics workshop, Paris, FranceJointly embedding multiple single-cell omics measurementsslides
2019/9/18MINES ParisTech Data Science Day, Paris, FranceLearning from ranks, learning to rankslides
2019/9/12EMBO workshop Network inference in biology and disease, Naples, ItalyNetwork inference from single cell dataslides
2019/9/5DALI conference, San Sebastian, SpainPost-Selection Inference for Nonlinear Feature Selectionslides
2019/4/5The fugure of epidemiology in the big data era symposium, College de France, Paris, FranceMachine learning for precision medicineslides
2019/4/5Chaire Pari, Paris, FranceMachine learning for precision medicineslides
2019/4/5Imaging and machine learning workshop, IHP, Paris, FranceMachine learning on the symmetric groupslides
2019/3/21Artificial intelligence and physics, Institut Pascal, Orsay, FranceMachine learning on the symmetric groupslides
2019/2/12Ethics, Law and New applications of AI seminar, Ecole Polytechnique, Saclay, FranceMachine learning for precision medicineslides
2018/12/18Journees des prix mathematiques de l'Academie des Sciences, Rennes, FranceLearning from permutationsslides
2018/10/16Google learning theory workshop, Mountain View, USARelating Leverage Scores and Density using Regularized Christoffel Functionsslides
2018/10/9Seminaire des eleves, Orsay University, Orsay, FranceFrom DNA mutations to embeddings of permutationsslides
2018/8/1Takeuchi lab seminar, Nagoya Institute of Technology, Nagoya, JapanLearning with permutationsslides
2018/7/14Joint ICML and IJCAI Workshop on Computational Biology, Stockholm, SwedenSome challenges with single-cell gene expression dataslides
2018/6/262nd Data Science Summer School, Ecole Polytechnique, Palaiseau, FranceMachine learning for precision medicineslides
2018/5/183nd GENMED Workshop on Medical Genomics, Institut Pasteur, Paris, FranceThe 3D genomeslides
2018/5/17The 14th ICGC/1st ICGC-ARGO Scientific Workshop, Paris, FranceMachine learning for precision medicineslides
2018/4/4First NCI - Institut Curie Symposium, Institut Curie, Paris, FrancePatient stratification from somatic mutation profiles using gene networksslides
2018/3/22Deep learning: theory, algorithms and applications, RIKEN AIP, Tokyo, JapanPerm2vecslides
2018/3/9From molecules and cells to human health: ideas and concepts workshop, IHES,Bures-sur-Yvette, FranceMachine learning for patient stratification from genomic dataslides
2017/12/8Learning on Distributions, Functions, Graphs and Groups @NIPS 2017, Long Beach, USAA weighted Kendall kernelslides
2017/11/20Neurospin,Saclay, FranceMachine learning for patient stratification from genomic dataslides
2017/10/20Statistics seminar, Imperial College, London, UKLearning on the symmetric groupslides
2017/10/11Emerging Topics in Biological Networks and Systems Biology symposium, Swedish Collegium for Advanced Study, Uppsala, SwedenGraph wavelets to analyze genomic data with biological networksslides
2017/9/29Google Tech talk, Zurich, SwitzerlandMachine learning on the symmetric groupslides
2017/9/211st France-Japan machine learning workshop, ENS Paris, Paris, FranceLearning on the symmetric groupslides
2017/9/158th SFdS International Meeting on Statistical Methods in Biopharmacy, Paris, FranceIdentifying predictive biomarkers in high-dimensional genomic data from randomized clinical trialsslides
2017/7/13Mathematical methods of modern statistics workshop, CIRM, Luminy, FranceLearning on the symmetric groupslides
2017/7/4National Academy of Medicine, Paris, FranceMachine learning for cancer precision medicineslides
2017/6/29Algorithmic challenges in genomics reunion workshop, Simons Institute, UC Berkeley, Berkeley, USAZinbWave, a general and flexible method for signal extraction from single-cell RNA-seq dataslides
2017/6/12StatScale workshop, Lancaster University, Lancaster, UKLearning on the symmetric groupslides
2017/3/28BIRS workshop on Statistical and Computational Challenges in Large Scale Molecular Biology, Banff, CanadaCancer stratification from mutation profilesslides
2017/3/9LCQB seminar, Paris 6 University, Paris, FranceMachine learning for patient stratification from genomic dataslides
2017/3/7BIG N2N seminar, Ghent University, Ghent, BerlgiumMachine learning for precision medicineslides
2017/1/27Distinguished speaker seminar, Department of Statistics, University of Oxford, Oxford, UKMachine learning for patient stratification from genomic dataslides
2017/1/18Distinguished speaker colloquium, Max Planck Institute for Informatics, Saarbrücken, GermanyMachine learning for patient stratification from genomic dataslides
2016/12/15CFM-ENS data science chair inauguration, ENS Paris, Paris, FranceCancer prognosis on the symmetric groupslides
2016/12/1Paris Sciences and Data, Institut Curie, Paris, FranceMachine learning for patient stratification from genomic dataslides
2016/11/2"Les Mathematiques" seminar, ENS Paris, Paris, FranceFighting cancer with chinese lanternsslides
2016/10/10Krupp symposium From Machine Learning to Personalized Medicine, Max Planck Institute, Munich, GermanyMachine learning for precision medicineslides
2016/10/10Data Science Colloquium, ENS Paris, Paris, FranceCan big data cure cancer?slides
2016/10/7KAIST, Daejeon, South KoreaMachine learning for computational genomics and precision medicineslides
2016/05/05Memorial Sloan Kettering Cancer Center, New York, USAPatient stratification and cancer prognosis from molecular profilesslides
2016/02/05Computational cancer biology workshop, Simons Institute, Berkeley, USALearning from Omics Dataslides
2015/12/11Nonparametric Methods for Large Scale Representation Learning NIPS workshop, Montreal, CanadaLearning from rankingsslides
2015/11/24Miller Institute, UC Berkeley, USACan big data cure cancer?slides
2015/11/5Festival of Genomics, San Mateo, USAMachine Learning for Toxicogenetics and Drug Response Predictionslides
2015/8/6BIRS workshop on Statistical and Computational Challenges In Bridging Functional Genomics, Epigenomics, Molecular QTLs, and Disease Genetics, Banff, CanadaLearning in high dimensionslides
2015/4/16Statistics and Genomics seminar, UC Berkeley, Berkeley, USAA Convex Formulation for Joint RNA Isoform Detection and Quantification from Multiple RNA-Seq Samplesslides
2015/3/16C3BI kick-off meeting, Institut Pasteur, Paris, FranceMachine learning for personalized genomicsslides
2015/2/27Computational Biology Institute, Montpellier, FranceMachine learning for personalized genomicsslides
2015/1/27Institut Curie, U900 lab meeting, Paris, FranceStructured feature selectionslides
2015/1/12Optimization and Statistical Learning workshop, Les Houches, FranceNew matrix norms for structured matrix estimationslides
2014/11/21PROSPECTOM workshop, Grenoble, FranceMachine learning for personalized medicineslides video
2014/11/6Grenoble Computer Science Laboratory, Grenoble, FranceMachine learning for personalized medicineslides video
2014/10/10Sparse Representations, Numerical Linear Algebra, and Optimization workshop, BIRS, Banff, CanadaNew matrix norms for structured matrix estimationslidesvideo
2014/10/2CEA, Grenoble, FranceReconstructing the 3D architecture of the genomeslides
2014/7/24Department of Electical Engineering, Stanford University, Stanford, USAMachine learning for personalized medicineslides
2014/7/24Genentech, South San Francisco, USAMachine learning for personalized medicineslides
2014/7/7RADIANT project meeting, EMBL, Heidelberg, GermanyInferring a genome 3D structure and how it is related to gene regulation in malaria parasiteslides
2014/6/30Paris-Saclay Center for Data Science kick-off meeting, Saclay, FranceMachine learning for personalized genomicsslides
2014/6/26ABS4NGS project meeting, Lyon, FranceInferring a genome 3D structure and how it is related to gene regulation in malaria parasiteslides
2014/6/546th annual days of Statistics, Rennes, FranceMachine learning for personalized medicineslides
2014/5/14SeMoVi seminar, Grenoble, FranceMachine learning for personalized medicineslides
2014/4/29-30Machine Learning Summer School, Reykjavik University, Reykjavik IcelandKernel methods and computational biologyslides
2014/4/24MascotNum workshop, ETH Zurich, Zurich, SwitzerlandMachine learning for personalized medicineslides
2014/4/2Gouter scientifique Mines ParisTech pour 10-15 ansLe nombre d'orbrochure participant, guide educateur
2014/3/29Kernel methods for big data workshop, Polytech'Lille, Lille, FranceLearning with kernels: an introductionslides
2014/1/17Inference for Change-Point and Related Processes workshop, Isaac Newton Institute for Mathematical Sciences, Cambridge, UKThe group fused Lasso for multiple change-point detectionslides
2013/12/3UC Berkeley, Biostatistics seminar, Berkeley, USAOn segmentation of DNA copy number profilesslides
2013/11/13ML meetup, Paris, FranceMachine learning for personalized Medicineslides
2013/10/16Genome Sciences seminar, University of Washington, Seattle, USAOn segmentation of DNA copy number profilesslides
2013/8/6Machine Learning for Personalized Medicine summer school, Tuebingen, GermanyMachine learning in computational biology (the frequentist approach)slides
2013/8/62013 International Workshop on Machine Learning and Applications in Biology (MLAB 2013), Sapporo, JapanFlip-Flop: fast lasso-based isoform prediction from RNA-Seq dataslides
2013/8/113th Annual International Workshop on Bioinformatics and Systems Biology (IBSB 2013), Kyoto, JapanOn segmentation of DNA copy number profilesslides
2013/7/12Kyoto University Bioinformatics Center Seminar, Kyoto, JapanFlip-Flop: fast lasso-based isoform prediction from RNA-Seq dataslides
2013/7/1Kyoto University Informatics Seminar, Kyoto, JapanLearning with structured sparsity in computational biologyslides
2013/6/18Eighth IAPR International Conference on Pattern Recognition in Bioinformatics (PRIB 2013), Nice, FranceLearning with structured sparsity in computational biologyslides
2013/5/28Congress SMAI 2013, Seignosse, FranceFast sparse methods for genomic dataslides
2013/4/16Chalmers University, Gothenburg, SwedenFast sparse methods for genomic dataslides
2013/1/10Optimization and statistical learning workshop, Les Houches, FranceFast sparse methods for genomic dataslides
2012/11/8The 15th information-based inductive science workshop (IBIS 2012), Tsukuba University, Tokyo, JapanLearning with structured sparsity in computational biologyslides
2012/9/15From phenotypes to pathways 2012 workshop, Lucy Cavendish College, Cambridge, UKMachine learning for predictive biology
2012/8/62012 Sapporo Workshop on Machine Learning and Applications to Biology, Sapporo, JapanStructured feature selection for genomic dataslides
2012/7/98th World Congress in Probability and Statistics, Istanbul, TurkeyStructured feature selection for genomic dataslides
2012/3/29IMA workshop on Machine Learning: Theory and Computation, IMA, University of Minnesota, Minneapolis, USAGroup lasso for genomic dataslides
2012/2/9Statistics and Genomics seminar, UC Berkeley, USAMachine learning with prior knowledge for genomic dataslides
2012/2/6UCLA Bioinformatics program, Los Angeles, USAMachine learning with prior knowledge for genomic dataslides
2012/1/19Statistics, Applied Probability and Operational Research Seminar, University of Oxford, Oxford, UKGroup lasso for genomic dataslides
2011/11/28Modeling and analysis in the life science: a ReadiLab conference in Tokyo, Tokyo, JapanMachine learning in cancer genomicsslides
2011/11/14UCL machine learning seminar, Louvain-la-Neuve, BelgiumMachine learning in cancer genomicsslides
2011/11/10Mines ParisTech Mathematics and Systems seminar, Paris, FranceMachine learning in cancer genomicsslides
2011/11/8Machine learning for neuroimaging workshop, Marseille, FranceMachine learning and feature selection in bioinformaticsslides
2011/9/15"From phenotypes to pathways" ESF exploratory workshop, Lucy Cavendish College, Cambridge, UKInference of gene regulatory networksslides
2011/7/4Biointelligence symposium, Sophia Antipolis, FranceMachine learning in bioinformaticsslides
2011/6/17Informatics and mathematics sciences: interactions with biomedical sciences workshop, Paris, FranceMachine learning for cancer genomicsslides
2011/4/5Theatre de Fontainebleau, Fontainebleau, FranceGenomique et apres-genome: promesses et defisslides
2011/3/17StatLearn 2011, Grenoble, FranceIncluding prior knowledge in machine learning for genomic dataslides
2011/1/17"Point de vue" seminar, Paris 7 University, Paris, FranceOn feature selection and pattern detection in high dimensionslides
2011/1/7University College London London, UKInference of biological networks: from de novo to supervised approachesslides
2010/11/8-12Malaysia Genome Institute Bangi Selangor, MalaysiaMachine learning in computational and systems biologyslides, course homepage
2010/9/28Institut Curie, U900 seminar, Paris, FranceStatistical inference for complex systemsslides
2010/9/13-15International School on Mathematics "Guido Stampachhia", 50th workhop on Optimization, machine learning and bioinformatics, Centre "Ettore Majorna" for Scientific Culture, Erice, ItalySome topics on machine learning in bioinformaticsLecture 1, Lecture 2, Lecture 3
2010/9/9"From phenotypes to pathways" ESF exploratory workshop, Lucy Cavendish College, Cambridge, UKSome challenges in high-throughput high-content phenotypic screeningslides
2010/9/2Mathematical Statistics and Applications Workshop, Frejus, France.Multiple change-point detection in multiple signalsslides
2010/7/2610th annual International Workshop on Bioinformatics and Systems Biology (IBSB 2010), Kyoto University, Kyoto, Japan.Including prior knowledge in machine learning for genomic dataslides
2010/7/20Statistical Genomics in Biomedical Research workshop, Banff International Research Station (BIRS), Banff, CanadaIncluding prior knowledge in shrinkage classifiers for genomic dataslides
2010/5/62nd Strasbourg Summer School on Chemoinformatics, Obernai, FranceMachine learning for ligand-based virtual screening and chemogenomicsslides
2010/5/61st spring school on machine learning (EPAT 2010), Cap Hornu, FranceShrinkage classifiers for genomic and chemical dataslides
2010/4/30Systems and Modeling Seminar, University of Liege, Liege, BelgiumIncluding prior knowledge in shrinkage estimators for genomic dataslides
2010/3/25"In silico discovery of molecular probes and drug-like compounds: Success & Challenges" INSERM workshop, Saint-Raphael, FranceMachine learning for ligand-based virtual screening and chemogenomicsslides
2009/12/11NIPS 2009 Workshop: understanding multiple kernel learning methods, Whistler, CanadaDesigning and combining kernels: some lessons learned from bioinformaticsslides
2009/11/27Center for Statistics seminar, Goettingen University, Goettingen, GermanyCollaborative filtering in Hilbert spaces with spectral regularizationslides
2009/11/24Department of Computer Science seminar, Ecole normale superieure, Paris, FranceSome contributions of machine learning in bioinformaticsslides
2009/11/23Statistics seminar, Paris 6-7 Universities, Paris, FranceCollaborative filtering in Hilbert spaces with spectral regularizationslides
2009/11/16Workshop on Bioinformatics for Medical and Pharmaceutical Research, Institut Curie, Paris, FranceMachine learning in bioinformatics and drug discoveryslides
2009/10/23Journees STAR, IRISA, Rennes, FranceCollaborative filtering in Hilbert spaces with spectral regularizationslides
2009/10/13Biology of cellular systems graduate course, Ecole normale superieure, Paris, FranceMachine learning in bioinformatics and drug discoverypart 1part 2
2009/10/1The third school on Analysis of Patterns, Cagliari, ItalySupervised classification for structured data: applications in bio- and chemo-informaticsslides
2009/8/7Computational Biology Research Center, Tokyo, JapanKernel methods for virtual screening and in silico chemogenomicsslides
2009/8/5The Institute of Statistical Mathematics, Tokyo, JapanIncluding prior knowledge in shrinkage estimators for genomic dataslides
2009/8/4Human Genome Center, Institute of Medical Science, Tokyo University Tokyo, JapanInferring and using biological networksslides
2009/7/14Kyushu University, Department of Informatics, Kyushu, JapanGlobal alignment of protein-protein interaction networks by graph matching methodsslides
2009/7/6Kyoto University Bioinformatics Center seminar, Kyoto, JapanGlobal alignment of protein-protein interaction networks by graph matching methodsslides
2009/6/126th international workshop on computational systems biology (WCSB 2009) Aarhus, DenmarkInferring and using biological networksslides
2009/6/5Advances in the Theory of Control, Signals, and Systems, with Physical Modeling workshop, Bernoulli center, EPFLLausanne, SwitzerlandInference of biological networksslides
2009/5/4Statistical advances in Genome-scale Data Analysis workshop, Ascona, SwitzerlandIncluding prior knowledge in shrinkage estimators for genomic dataslides
2009/4/24Mathematics and industry workshop, IHES, Bures-sur-Yvette, FranceIn silico virtual screening for drug discoveryslides
2009/4/2Symposium on Learning and Data Science (SLDS 09), University Paris Dauphine Paris, FranceKernel design and learningslides
2009/3/20MAP5 colloquium, University of Paris Descartes, Paris, FranceInference of missing edges in biological networksslides
2009/3/10"Mathematics, evolution and genome" seminar, University of Provence, Marseille, FranceSome contributions of machine learning to bioinformaticsslides
2009/2/23MedChem Europe conference, Berlin, GermanyIn silico chemogenomics with support vector machinesslides
2009/2/12Institut Curie, Scientific and Medical Days, Paris, FranceMachine learning for cancer informaticsslides
2009/2/10Ecole Polytechnique, applied math seminar, Palaiseau, FranceSome contributions of machine learning to bioinformaticsslides
2009/1/21Bioinformatics of plasmodium falciparum workshop, Paris, FranceAnalyzing the transcriptional response of P. falciparum to drugs and stressslides
2008/11/4Centre hospitalier de l'Université Laval (CHUL) Research Centre, Quebec, CanadaInfering and using biological networksslides
2008/11/3Laboratoire d'informatique, University of Laval, Quebec, CanadaSome contributions of machine learning to bioinformaticsslides
2008/11/27Atelier statistique de la SFDS, Paris, FranceMachine learning in postgenomicsslides
2008/11/13Seminar Bristol University, Bristol, UKInference of missing edges in biological networksslides
2008/10/23Seminar Telecom ParisTech, Paris, FranceInference of missing edges in biological networksslides
2008/8/29"Statistics and modelling of networks" workshop, Rennes, FranceInference of missing edges in biological networksslides
2008/7/28Institute of Statistical Mathematics, Tokyo, JapanInference of biological networks with supervised machine learningslides
2008/7/7Bioinformatics Center seminar, Kyoto University, Kyoto, JapanInference of biological networks with supervised machine learningslides
2008/6/27National Institute of Informatics, Tokyo, JapanA path following approach for graph matchingslides
2008/6/3Second Canada-France congress of mathematics, Montreal, CanadaCollaborative filtering in Hilbert spaces with spectral regularizationslides
2008/5/23Machine learning seminar, Xerox Research Centre Europe, Grenoble, FranceCollaborative filtering with attributesslides
2008/5/20U900 seminar, Institut Curie, Paris, FranceInference of biological networks with supervised machine learningslides
2008/5/16"Statistical modelling and analysis of biological network" INSERM workshop (atelier 184), Saint-Raphael, FranceInference of biological networks with supervised machine learningslides
2008/4/16The Third Conference on Systems Biology, University Paris Descartes, Paris, FranceHow to infer gene networks from gene expression data?slides
2008/4/9"Informatics for Biology" course, Institut Pasteur, Paris, FranceMachine learning in computational biologypart 1, part 2
2008/4/1The learning workshop, Snowbird, USACollaborative filtering with attributesslides
2008/3/28cBio seminar, Memorial Sloan Kettering Cancer Center, New York, USASome contributions of machine learning to bioinformaticsslides
2008/2/12Seminar of Probability, Institut Joseph Fourier, Grenoble, FranceStatistical learning on graphsslides
2008/1/2310th European Symposium on Statistical Methods for the Food Industry (AGROSTAT'08), Louvain-la-Neuve, BelgiumKernel methods for QSAR and virtual screeningslides
2007/11/19"Context tree models" workshop, Telecom, Paris, FranceThe context tree weighting kernelslides
2007/10/19Multimodal Project Meeting, National Institute of Informatics, Tokyo, JapanVirtual screening with support vector machinesslides
2007/10/17Tokyo Institute of Technology Tokyo, JapanQSAR and virtual screening with support vector machinesslides
2007/10/12The 2nd Workshop on Machine Learning and Optimization at the ISM, Tokyo, JapanCollaborative filtering with attributesslides
2007/10/5The International Workshop on Data Mining and Statistical Science (DMSS 2007), Tokyo, JapanStatistical learning with graph kernelsslides
2007/9/28Institute of Mathematicsl Statistics open forum, Tokyo, JapanKernels for strings and applications in bioinformaticsslides
2007/9/24Machine Learning in Systems Biology Conference (MLSB 2007), Evry, FranceSupervised inference of biological networksslides
2007/9/7VI Colloquium Chemiometricum Mediterraneum, Saint-Maximin, FranceQSAR and virtual screening with support vector machinesslides
2007/7/11JOBIM 2007 conference, Marseille, FranceSupervised reconstruction of biological networksslides
2007/6/13 6th IAPR -TC-15 Workshop on Graph-based Representations in Pattern Recognition (GbR 2007), Alicante, SpainGraph kernels and applications in chemoinformaticsslides
2007/6/8"Signal, pattern recognition and kernel methods" workshop, Telecom, Paris, FranceA kernel for time seriesslides
2007/5/29The 12th International Conference on Applied Stochastic Models and Data Analysis (ASMDA'07), Chania, GreeceKernel matrix regressionslides
2007/5/16Seminar statistics and probability, University of Lille, Lille, FranceRegularization of kernel methods by decreasing the bandwidth of the Gaussian kernelslides
2007/5/10Systems Biology seminar, Institut Pasteur, Paris, FranceClassification of gene expression data using gene networks slides
2007/4/25Second Systems Biology workshop, Paris 5 University, Paris, FranceClassification of gene expression data using gene networksslides
2007/4/11"JournÈes de statistiques du sud" workshop, University of Nice, Nice, FranceStatistical learning with graphsslides
2007/4/10Statistics and Genome workshop, University of Nice, Nice, FranceClassification of gene expression data using gene networksslides
2007/2/14Institute for Infocomm Research, SingaporeSupervised inference of biological networksslides
2007/2/8Bioinformatics Center, Kyoto University, Kyoto, JapanKernels methods for strings and graphsslides
2007/2/2ENFIN NoE Meeting, Genoscope, Evry, FranceSupervised inference of biological networks from heterogeneous genomic dataslides
2007/1/26International conference on Embeddings of Graphs and Groups into Hilbert and Banach spaces with applications, EPFL, Lausanne, SwitzerlandStatistical learning on graphs and groupsslides
2007/1/11JournÈe thÈmatique Ouest GÈnopole "Promoteurs", IRIS, Rennes, FranceMotif finding in promoter region with support vector machinesslides
2006/12/9NIPS workshop "Open problems in computational biology", Whistler, CanadaMetric learning pairwise kernel for graph inference with SVMslides
2006/12/1Conference "Chimiometrie 2006", Paris, FranceQSAR and virtual screening with support vector machinesslides
2006/11/27Current Challenges in Kernel Methods workshop (CCKM'06), Brussel, BelgiumKernels and kernel methods for biological sequencesslides
2006/9/21International Conference on Grammatical Inference (ICGI 2006), Tokyo, JapanClassification of biological sequences with kernelsslides
2006/7/28Machine Learning Summer School (MLSS 2006), Taipei, TaiwanRegularization of kernel methods by decreasing the bandwidth of the Gaussian kernelslides, movie 1, movie 2
2006/7/27Machine Learning Summer School (MLSS 2006), Taipei, TaiwanKernel methods in bioinformaticsslides
2006/7/5ESBIC meeting, Institut Curie, Paris, FranceSpectral approaches to integrate gene expression and gene networksslides
2006/6/2Conference "Mathematical foundations of learning theory", Ecole normale supÈrieure, Paris, FranceRegularization of kernel methods by decreasing the bandwith of the Gaussian kernelslides
2006/5/22Seminar at the Pierre Fabre Institute of Drug Sciences and Technologies, Toulouse, FranceVirtual screening with support vector machinesslides
2006/5/19Seminar of the Centre d'Ecologie Cellulaire, FacultÈ de mÈdecine PitiÈ-SalptriËre, Paris, FranceAnalysis of microarray data with pathway informationslides
2006/05/18CMLA workshop, Ecole Normale Superieure de Cachan, Cachan, FranceClassification of biological sequences with kernel methodsslides
2006/05/10Workshop on Knowledge Discovery and Emergent Complexity in Bioinformatics (KBECB 2006) Ghent, Belgium.Machine learning approaches for reconstruction of genetic networksslides
2005/12/14"Bioinformatics: algorithms, structures and statistics" workshop, Ecole Polytechnique, Palaiseau, FranceSupervised gene network inferenceslides
2005/12/10"Kernel methods and structured domain" workshop, Whistler, CanadaKernels for biological sequencesslides
2005/11/18"Reverse modeling of biological regulatory networks: expectation and limitations" workshop, Evry, FranceSupervised gene network inferenceslides
2005/11/14Seminar of applied statistics, Montpellier, FranceSupervised gene network inferenceslides
2005/10/21Bioinformatics Center Seminar, Kyoto University, Kyoto, JapanMotif finding in promoter region with support vector machinesslides
2005/10/18Bioinformatics Center Lecture, Kyoto UniversityKyoto, JapanSupport vector machines and kernel methods in bioinformaticsslides
2005/08/18Institute for Genomics and Bioinformatics seminar, UC Irvine, Irvine, USASupervised gene network inferenceslides
2005/07/05JOBIM conference, Lyon, FranceAnalyse du transcriptomeslides
2005/06/06Journees de Statistiques de ls SFdSPau, FranceSupervised gene network inferenceslides
2005/03/17"Science for all" seminar, Ecole des Mines de Paris, Fontainebleau, FranceVoyage au coeur du gÈnomeslides (10MB)
2005/03/08ICPB seminar, Mathematics Institute, University of Warwick, Warwick, UKSupervised network inferenceslides
2005/02/0850th NIBB conference on "Structure and Dynamics of Complex Biological Networks, Okazaki, JapanSupervised network inferenceslides, abstract
2005/01/17SÈminaire parisien de statistiques, IHP, Paris, FranceSupervised graph inferenceslides
2004/12/21Symposium on perspectives in computational and theoretical biology, Shanghai, P.R. ChinaKernel methods in computational and systems biologyslides
2004/12/15NIPS'04 conference Vancouver, CanadaSupervised graph inferenceslides
2004/12/10Habilitation Ecole des Mines, FranceKernel methods in computational biologyslides
2004/12/06Bioinformatics seminar, INRA, Jouy-en-Josas, FranceAnalysis and inference of gene networks from genomic dataslides
2004/11/15Bioinformatics seminar, Bioinformatics Center, Kyoto University, Kyoto, JapanAnalysis and inference of gene networks from genomic dataslides
2004/11/5Statistics seminar, Institute of Statistical Mathematics, Tokyo, JapanAnalysis and inference of gene networks from genomic dataslides
2004/10/8"Complex stochastic systems in biology and medicine" workshop, Ludwig-Maximilians University Munich, GermanyAnalysis and inference of gene networks from genomic dataslides
2004/9/16EBI Industry Program Meeting, European Bioinformatics Institute, Cambridge, UKAnalysis and inference of metabolic networksslides
2004/9/911Ëmes Rencontres de la SociÈtÈ Francophone de Classification, Bordeaux, FranceUn noyau d'alignement local pour la classification de sÈquences biologiquesslides, paper
2004/7/30"SIG Bioinformatics and Statistical Physics", Glasgow, UKAnalysis and inference of gene networks from genomic dataslides
2004/5/21"Advanced microarray data analysis" course, Center for Biological Sequence Analysis, Elsinore, DenmarkMetabolic networks: activity detection and inferenceslides
2004/5/6"Gene regulatory network" workshop, INRIA,Grenoble, FranceMetabolic networks: activity detection and inferenceslides
2004/4/14Noble lab seminar, University of Washington, Genome Science Seattle, USANetwork inference and inference on networksslides
2004/4/6-9The learning workshop, Snowbird, Utah, USAKernel Methods in Computational Biologyslides
2004/3/24-28Physiology of Yeasts and Filamentous Fungi meeting, Biarritz, Franceslides
2004/2/18Max Planck Instit¸t f¸r Informatik,Saarbr¸cken, GermanyExtracting pathway activity from gene expression dataslides
2004/2/6Marketing seminar, INSEAD, Fontainebleau, FranceInference on graphs with support vector machinesslides
2004/2/5Functional genomics seminar, CEA, Evry, FranceExtracting metabolic pathway activity from microarray dataslides
2004/1/30MODBIO seminar, LORIA, Nancy, FranceSVMs, kernel methods, and applications in bioinformaticsslides
2004/1/26Geometrica seminar, INRIA, Nice, FranceSVMs, kernel methods, and applications in bioinformaticsslides
2004/1/23Spatial statistics seminar, INAPG, Paris, FranceInfÈrence sur graphes et groupesslides
2004/1/19Paris 6 University, Statistics seminar, Paris, FranceSVMs, kernel methods, and applications in bioinformaticsslides
2003/11/25Ecole normale superieure, student's computer science seminar, Paris, FranceStatistical learning theory, SVMs, and Bioinformaticsslides
2003/11/21Ghent University, Ghent, BelgiumSVM, kernel methods and applications in bioinformaticsslides
2003/10/27Kyoto University Bioinformatics Center seminar, Kyoto, japanSVM, kernel methods and applications in bioinformaticsslides
2003/10/17Machine Learning in Bioinformatics conference, Bruxelles, BelgiumSVM, kernel methods, and applications in bioinformaticsslides
2003/10/16Machine Learning in Bioinformatics industrial workshop, Bruxelles, BelgiumSupport vector machines in bioinformatics: three examplesslides
2003/9/27European Conference on Computational Biology (ECCB 2003), Paris, France.Extracting metabolic pathway activity from microarray dataslides
2003/9/19JournÈes de GÈostatistiques, Fontainebleau, France.Krigeage sur graphes et groupesslides
2003/9/9Institut Curie, Paris, France.Extracting metabolic pathways activity from microarray dataslides
2003/6/27"Le Mirail" Toulouse University, Toulouse, France.Kernel methods in computational biologyslides
2003/6/20INSA, Molecular Physiology of lower Eukaryots group, Toulouse, France.Kernel methods in computational biology: two examplesslides
2003/6/19Sanofi, centre de bio-informatique, Toulouse, France...
2003/6/16Ecole Polytechnique, center for applied mathematics seminar, Palaiseau, France.Kernel methods in computational biology: tree examplesslides
2003/6/5American Institute of Mathematics, "Geometric models of biological phenomena" workshop, Palo Alto, CA, USA.Kernels for phylogenetic treesslides
2003/5/9UC Berkeley computer science division seminar, Berkeley, CA, USA.Kernel methods in computational biology: Three examplesslides
2003/5/6UC Davis, department of statistics seminar, Davis, CA, USA.Probabilistic kernels for structured objectsslides
2003/4/24INRIA, Roquencourt, France.Kernel methods in computational biologyslides
2003/4/4SABRES statistics seminar, Vannes, France.Kernel methods and applications in computational biologyslides
2003/3/31Workshop "Statistical analysis of DNA microarray data", Toulouse, France.Monitoring the activity of metabolic pathways with DNA chipsslides, Abstract
2003/1/24-27Workshop "Mathematical aspects of molecular biology : Towards new constructions", Nara, Japan."DNA microarrays" and "Kernel methodsin computational biology"slides 1, slides 2
2003/1/15-18Workshop "Statistical Learning in Classification and Model Selection", EURANDOM, Eindhoven, The NetherlandsProbabilistic kernels for structured objectsslides
2003/1/14"Statistics and genome" seminar, Evry University and INRA, Jouy-en-Josas, FranceMethodes a noyau en bio-informatiqueslides
2003/1/10SVM seminar, Orsay University, FranceProbabilistic kernelsslides
2002/12/10Neural Information Processing Systems (NIPS 2002), Vancouver, CanadaGraph-driven features extraction from microarray data using diffusion kernels and kernel CCAslides, paper, poster
2002/12/5INRIA Rhone-Alpes (Prof. Rechenmann), Grenoble, FranceMÈthodes ‡ noyau en bioinformatiqueslides
2002/11/14Conference Statistical Learning, Theory and Applications, CNAM, Paris, FranceExtracting active metabolic pathways from gene expression data using kernel CCA"slides, abstract
2002/11/5INSA Toulouse, (Prof. Monsan), Toulouse, FranceMÈthodes ‡ noyau en bioinformatiqueslides
2002/8/710th International Conference on Intelligent Systems for Molecular Biology (ISMB 02), Edmonton, CanadaA tree kernel to analyse phylogenetic profilesslides
2002/8/24th BioPathways Consortium Meeting, Edmonton, CanadaExtracting correlations between pathways and microarray dataslides
2002/7/17-19Human genome center, University of Tokyo (Prof. Takagi and Nakai), Tokyo, Japan SVM, kernel methods and bioinformatics (3 days)Day 1, day 2, day 3
2002/7/12Research Institute for Mathematical Science, Kyoto University (Dr. Kato and Hasegawa), Kyoto, JapanData mining the proteome in Reproducible Kernel Hilbert Spacesslides
2002/6/28Graduate school of mathematics seminar, Kyushu University (Prof. Yanagawa), Fukuoka, JapanSupport vector machines and applications in bioinformaticsslides
2002/4/22Bioinformatics center colloquim, Kyoto University (Prof. Kanehisa), Kyoto, JapanKernel methods in bioinformaticsslides
2002/3/8Genetic knowledge science lab seminar, JAIST (Prof. Konagaya), Kanazawa, JapanSVMs in bioinformaticsslides
2002/2/2"Mathematical modeling and statistical analysis in biomedical research" Symposium, Hiroshima university (Porf. Ohtaki), Hiroshima, JapanSVMs in bioinformaticsslides, abstract
2002/1/7Pacific Symposium on Biocomputing (PSB 2002), Lihue, Hawaii, USASVM prediction of signal peptide cleavage site using a new class of kernels for stringsslides
2001/11/21Computational Biology Research Center seminar (Dr. Tsuda), Tokyo, JapanKernels for discrete objetcsslides
2001/11/20Science and Technology workshop 2001, Tokyo, JapanMathematics and post-genomicsAbstract (French)
2001/5/21Bioinformatics center colloquim, Kyoto University (Prof. Kanehisa), Kyoto, JapanStatistical sequence modellingslides
2001/3/29Ecole normale superieure, Paris, FranceStatistical methods for language modelling (PhD defense)slides, Dissertation
2001/3/1Probability and Statistics seminar, Paris-South university, Orsay, France (with G. Blanchard)Generalization error bounds for aggregated classifiers
2001/2/22Second International Conference on Intelligent Text Processing and Computational Linguistics (CICLing01), Mexico City, MexicoText categorization using adaptive context treesslides
2000/11/2"Mathematical foundations fo natural Language modeling" IMA workshop, University of Minnesota, Minneapolis, USAAdaptive context trees and text categorizationAbstract
2000/8/30Garchy Seminar on Mathematical Statistics and Applications, Garchy, FranceUniversal prediction with double mixture estimatorsPreprint
2000/3/14Statistics and genome seminar, Evry university (Prof. Prum), Evry, FranceAdaptive context trees for string modelling
1999/12/13Statistics seminar, Ecole normale superieure, Paris, FranceOracle inequalities for adaptive context trees


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